miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: Browse :: Contigs




EST name EST sequence
gi|296562968|gb|GW947384.1|GW947384 AGTGAATCATAGAAATAGAAATAGAAATTGGAATTGGAATTGAAGCCATGAGCGTCAACATGGTGGCAGTGGCGTCCATG
GCCACTCCATCCATCACCATCAGCTTCACTAATTCCAAATCACTTTCTCTTTCCTCTTCTTCTTCTTCTTCTTCACTTCC
CAGCTGCTGGTCTTCTTCTAATTCAACTCTTCGTCGTCATCCTTCTTCTTGTGCCCTCACTCTTCGTTGTGGCGCCGCCG
TCTTTGCCTCTTCCTCTTCCCCTTCCATTTCCCCCAATTCCAATTCAAGTTCCATGATTGTGGCCGCGCTTGGAATCGAT
GCACAGCCTGAGCGTGATTACGAGCCTCTTCAGGTTATGATTTCGGGTGCTCCTGCTTCCGGAAAAGGTACTCAATGCGA
GCTTATCAAACACAAGTACGGTTTAGTGCACGTTGCTGCTGGTGATTTGCTTAGGGCTGAGATCGCCACTGGCAGTGATA
ATGGAAAGCTTGCTAAACAGTATATGGAGAAAGGTCAACTTGTTC




Most similar to sp|Q9FIJ7|KADC2_ARATH

>BLASTX 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>sp|Q9FIJ7|KADC2_ARATH Probable adenylate kinase 2, chloroplastic
           OS=Arabidopsis thaliana GN=At5g47840 PE=2 SV=1
          Length = 283

 Score =  108 bits (270), Expect = 2e-23
 Identities = 50/61 (81%), Positives = 59/61 (96%)
 Frame = +3

Query: 342 EPLQVMISGAPASGKGTQCELIKHKYGLVHVAAGDLLRAEIATGSDNGKLAKQYMEKGQL 521
           EPL++MISGAPASGKGTQCELI HKYGLVH++AGDLLRAEIA+GS+NG+ AK++MEKGQL
Sbjct: 63  EPLKIMISGAPASGKGTQCELITHKYGLVHISAGDLLRAEIASGSENGRRAKEHMEKGQL 122

Query: 522 V 524
           V
Sbjct: 123 V 123